The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides52307 | ADENYLATE CYCLASE TYPE 1 |
Paelopatides52311 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Paelopatides52312 | PROSTAGLANDIN REDUCTASE |
Paelopatides52313 | |
Paelopatides52314 | |
Paelopatides52315 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides52317 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides52318 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides52319 | |
Paelopatides52320 | |
Paelopatides52321 | TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 |
Paelopatides52322 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
Paelopatides52323 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides52324 | DIMETHYLANILINE MONOOXYGENASE |
Paelopatides52325 | |
Paelopatides52326 | |
Paelopatides52327 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 |
Paelopatides52328 | ACYL-COA DEHYDROGENASE |
Paelopatides52329 | ENDONUCLEASE-RELATED |
Paelopatides52330 | POL PROTEIN |
Paelopatides52331 | PROTEIN CBG26694 |
Paelopatides52332 | |
Paelopatides52333 | PARANEOPLASTIC ANTIGEN |
Paelopatides52334 | PROTEIN CBG26694 |
Paelopatides52335 | ARYL HYDROCARBON RECEPTOR |
Paelopatides52336 | RETROTRANSPOSON |
Paelopatides52337 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides52338 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides52339 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides52340 | ACROSIN-RELATED |
Paelopatides52341 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Paelopatides52342 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
Paelopatides52343 | EPSIN/ENT-RELATED |
Paelopatides52344 | PEPTIDASE M20 |
Paelopatides52345 | PEPTIDASE M20 |
Paelopatides52346 | ACYL-COENZYME A SYNTHETASE |
Paelopatides52347 | RIBONUCLEIC ACID BINDING PROTEIN S1 |
Paelopatides52348 | NETRIN RECEPTOR UNC5 |
Paelopatides52349 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52350 | |
Paelopatides52351 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Paelopatides52352 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Paelopatides52353 | REVERSE TRANSCRIPTASES |
Paelopatides52354 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides52355 | DYNEIN HEAVY CHAIN |
Paelopatides52357 | TROPOMODULIN |
Paelopatides52358 | CULLIN |
Paelopatides52359 | PERSULFIDE DIOXYGENASE ETHE1 |
Paelopatides52360 | |
Paelopatides52361 | PHOSPHOLIPID SCRAMBLASE-RELATED |