The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides52702 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Paelopatides52703 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Paelopatides52704 | STG PROTEIN |
Paelopatides52705 | |
Paelopatides52706 | CENTROSOMAL PROTEIN OF 112 KDA |
Paelopatides52707 | MUCIN-17 |
Paelopatides52708 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52709 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52710 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides52711 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52712 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52714 | SI:CH211-196P9.1-RELATED |
Paelopatides52715 | |
Paelopatides52716 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52718 | INHIBITOR OF APOPTOSIS |
Paelopatides52719 | |
Paelopatides52720 | |
Paelopatides52721 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides52722 | |
Paelopatides52723 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52724 | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING |
Paelopatides52725 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Paelopatides52726 | REPETIN |
Paelopatides52727 | RE52028P |
Paelopatides52728 | PEPTIDASE |
Paelopatides52729 | |
Paelopatides52730 | |
Paelopatides52731 | FERMITIN 2-RELATED |
Paelopatides52732 | FERMITIN 2-RELATED |
Paelopatides52733 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52734 | DC12-RELATED |
Paelopatides52735 | |
Paelopatides52736 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides52737 | |
Paelopatides52738 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides52739 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides52740 | MATRIX METALLOPROTEINASE |
Paelopatides52741 | ZGC:195170 |
Paelopatides52742 | IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1 |
Paelopatides52743 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52744 | |
Paelopatides52745 | |
Paelopatides52746 | |
Paelopatides52747 | CYTIDINE DEAMINASE |
Paelopatides52748 | BUCENTAUR RELATED |
Paelopatides52749 | PROTEIN CBG26694 |
Paelopatides52750 | SI:CH211-196P9.1-RELATED |
Paelopatides52751 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
Paelopatides52752 | BUCENTAUR RELATED |
Paelopatides52753 |