About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52813
Paelopatides52814-
Paelopatides52815ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides52816ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides52817SULFIDE:QUINONE OXIDOREDUCTASE
Paelopatides52818ABHYDROLASE DOMAIN-CONTAINING PROTEIN
Paelopatides52819ABHYDROLASE DOMAIN-CONTAINING PROTEIN
Paelopatides52820TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides52821REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52822KH DOMAIN CONTAINING RNA BINDING PROTEIN
Paelopatides52823KH DOMAIN CONTAINING RNA BINDING PROTEIN
Paelopatides52824PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides52825
Paelopatides52826ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides52827BONUS, ISOFORM C-RELATED
Paelopatides52828
Paelopatides52829POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides52830POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides52831NETRIN RECEPTOR UNC5
Paelopatides52832
Paelopatides52835OPSIN
Paelopatides52836
Paelopatides52837SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52838PR DOMAIN ZINC FINGER PROTEIN
Paelopatides52839
Paelopatides52840
Paelopatides52841
Paelopatides52842LIPOXYGENASE
Paelopatides52843DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
Paelopatides52844HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides52845
Paelopatides52846HL01030P-RELATED
Paelopatides52847TRANSPOSON
Paelopatides52848L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides52849ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides52850WSCD FAMILY MEMBER CG9164
Paelopatides52851
Paelopatides52852
Paelopatides52853
Paelopatides52854ZINC FINGER PROTEIN-LIKE 1
Paelopatides52855METALLOPHOSPHOESTERASE, CALCINEURIN SUPERFAMILY
Paelopatides52856ALPHA-GLUCOSIDASE
Paelopatides52857ALPHA-GLUCOSIDASE
Paelopatides52858SI:CH211-22I13.2
Paelopatides52859
Paelopatides52860
Paelopatides52861TRAF-LIKE SUPERFAMILY PROTEIN
Paelopatides52862RIBOPHORIN I
Paelopatides52863RIBOPHORIN I
Paelopatides52864BAX INHIBITOR-RELATED
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