The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides52918 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides52919 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides52920 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides52921 | |
| Paelopatides52922 | T-LYMPHOCYTE ACTIVATION ANTIGEN |
| Paelopatides52923 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides52924 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides52925 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides52926 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides52927 | |
| Paelopatides52928 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides52929 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides52930 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides52931 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides52932 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides52935 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides52936 | |
| Paelopatides52937 | EXPRESSED PROTEIN |
| Paelopatides52938 | |
| Paelopatides52939 | |
| Paelopatides52940 | APOLIPOPROTEIN L |
| Paelopatides52941 | |
| Paelopatides52942 | |
| Paelopatides52943 | PROTEIN CBG23806 |
| Paelopatides52944 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides52945 | |
| Paelopatides52946 | COILED-COIL DOMAIN-CONTAINING PROTEIN 150 |
| Paelopatides52947 | PARANEOPLASTIC ANTIGEN |
| Paelopatides52948 | PROTEIN CBG26694 |
| Paelopatides52949 | ENDONUCLEASE-RELATED |
| Paelopatides52950 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| Paelopatides52951 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides52952 | SPLICING FACTOR SF3A-RELATED |
| Paelopatides52953 | |
| Paelopatides52954 | SPLICING FACTOR SF3A-RELATED |
| Paelopatides52955 | |
| Paelopatides52956 | |
| Paelopatides52957 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52959 | |
| Paelopatides52960 | |
| Paelopatides52961 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides52962 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides52963 | |
| Paelopatides52964 | |
| Paelopatides52965 | 80 KDA MCM3-ASSOCIATED PROTEIN |
| Paelopatides52966 | |
| Paelopatides52967 | PYRROLINE-5-CARBOXYLATE REDUCTASE |
| Paelopatides52968 | HYDROXYMETHYLGLUTARYL-COA LYASE |
| Paelopatides52969 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides52970 | HYDROXYMETHYLGLUTARYL-COA LYASE |
