The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53073 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides53074 | |
Paelopatides53075 | |
Paelopatides53076 | BAT2 HLA-B-ASSOCIATED TRANSCRIPT 2 |
Paelopatides53077 | |
Paelopatides53078 | ALPHA-AMYLASE FAMILY MEMBER |
Paelopatides53079 | ARYLSULFATASE FAMILY MEMBER |
Paelopatides53080 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
Paelopatides53081 | |
Paelopatides53082 | |
Paelopatides53083 | STRICTOSIDINE SYNTHASE-RELATED |
Paelopatides53084 | FI04643P-RELATED |
Paelopatides53085 | ENDONUCLEASE |
Paelopatides53089 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides53090 | RETROTRANSPOSON |
Paelopatides53091 | |
Paelopatides53092 | |
Paelopatides53093 | NOTCH LIGAND FAMILY MEMBER |
Paelopatides53094 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides53095 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides53096 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides53097 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
Paelopatides53098 | |
Paelopatides53099 | TRANSDUCIN BETA-LIKE 3 |
Paelopatides53100 | |
Paelopatides53101 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Paelopatides53102 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Paelopatides53109 | OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN |
Paelopatides53110 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Paelopatides53111 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Paelopatides53112 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
Paelopatides53113 | BUCENTAUR RELATED |
Paelopatides53114 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
Paelopatides53115 | MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGEN |
Paelopatides53116 | |
Paelopatides53117 | RETROTRANSPOSON |
Paelopatides53118 | RETROTRANSPOSON |
Paelopatides53119 | |
Paelopatides53120 | |
Paelopatides53121 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53122 | THAP DOMAIN-CONTAINING PROTEIN 6 |
Paelopatides53123 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Paelopatides53124 | ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED |
Paelopatides53125 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 |
Paelopatides53126 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 |
Paelopatides53127 | PROTEIN DISPATCHED HOMOLOG 3 |
Paelopatides53128 | PROTEIN DISPATCHED HOMOLOG 3 |
Paelopatides53129 | PROTEIN DISPATCHED HOMOLOG 3 |
Paelopatides53130 | NETRIN RECEPTOR UNC5 |
Paelopatides53133 |