About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53023
Paelopatides53024
Paelopatides53025SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides53026REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53027
Paelopatides53028ARRESTIN DOMAIN CONTAINING PROTEIN
Paelopatides53029
Paelopatides53030CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53031PUTATIVE-RELATED
Paelopatides53032
Paelopatides53033
Paelopatides53034PLAT DOMAIN-CONTAINING PROTEIN
Paelopatides53035LIPOXYGENASE
Paelopatides53036
Paelopatides53037PROTEIN CBG26694
Paelopatides53038PROTEIN CBG26694
Paelopatides53039HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides53040EXPRESSED PROTEIN
Paelopatides53041DEOXYRIBOSE-PHOSPHATE ALDOLASE
Paelopatides53042REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53043
Paelopatides53044PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides53045RETROTRANSPOSON
Paelopatides53046CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53047
Paelopatides53048HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides53049HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides53050
Paelopatides53051
Paelopatides53052HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides53053
Paelopatides53054PROTEIN CBG26694
Paelopatides53055APG9 AUTOPHAGY 9
Paelopatides53056LYSYL-TRNA SYNTHETASE
Paelopatides53057
Paelopatides53058
Paelopatides53059FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides53060FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides53061FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides53062FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides53063
Paelopatides53064
Paelopatides53065POL PROTEIN
Paelopatides53066PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides5306740S RIBOSOMAL PROTEIN S3A
Paelopatides5306852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides53069-
Paelopatides53070ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides53071
Paelopatides53072EPM2A-INTERACTING PROTEIN 1
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