The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53187 | |
Paelopatides53188 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
Paelopatides53189 | EME1 PROTEIN |
Paelopatides53190 | |
Paelopatides53191 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53192 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53193 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53194 | |
Paelopatides53195 | RIBONUCLEASE P SUBUNIT P29 |
Paelopatides53196 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53197 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides53198 | |
Paelopatides53199 | SI:CH211-196P9.1-RELATED |
Paelopatides53200 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53201 | LD39211P |
Paelopatides53202 | LD39211P |
Paelopatides53203 | LD39211P |
Paelopatides53204 | LD39211P |
Paelopatides53205 | SIMILAR TO CDNA SEQUENCE BC052040 |
Paelopatides53206 | AMSH-LIKE PROTEASE |
Paelopatides53207 | GLUTATHIONE S-TRANSFERASE |
Paelopatides53208 | GLUTATHIONE S-TRANSFERASE |
Paelopatides53209 | GLUTATHIONE S-TRANSFERASE |
Paelopatides53210 | PEROXISOMAL MEMBRANE PROTEIN PEX14 |
Paelopatides53211 | GLUTATHIONE S-TRANSFERASE |
Paelopatides53212 | |
Paelopatides53213 | BONUS, ISOFORM C-RELATED |
Paelopatides53214 | BONUS, ISOFORM C-RELATED |
Paelopatides53215 | SODIUM/NUCLEOSIDE COTRANSPORTER |
Paelopatides53216 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53217 | EXPRESSED PROTEIN |
Paelopatides53218 | PEPTIDASE S8 |
Paelopatides53219 | |
Paelopatides53220 | |
Paelopatides53221 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides53222 | |
Paelopatides53223 | RETROTRANSPOSON |
Paelopatides53224 | RETROTRANSPOSON |
Paelopatides53225 | SI:CH211-196P9.1-RELATED |
Paelopatides53226 | - |
Paelopatides53227 | - |
Paelopatides53228 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides53229 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
Paelopatides53230 | |
Paelopatides53231 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53232 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53233 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53234 | MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B |
Paelopatides53235 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53236 | TRANSPOSASE, PUTATIVE-RELATED |