The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides53288 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53289 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53290 | |
| Paelopatides53291 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
| Paelopatides53292 | NEPHROCYSTIN |
| Paelopatides53293 | |
| Paelopatides53294 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Paelopatides53295 | |
| Paelopatides53296 | |
| Paelopatides53297 | |
| Paelopatides53298 | |
| Paelopatides53299 | |
| Paelopatides53300 | |
| Paelopatides53301 | |
| Paelopatides53302 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| Paelopatides53303 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53304 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53305 | |
| Paelopatides53306 | NETRIN/LAMININ-RELATED |
| Paelopatides53307 | |
| Paelopatides53308 | 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR |
| Paelopatides53309 | |
| Paelopatides53310 | |
| Paelopatides53311 | NETRIN/LAMININ-RELATED |
| Paelopatides53312 | NETRIN/LAMININ-RELATED |
| Paelopatides53313 | NETRIN/LAMININ-RELATED |
| Paelopatides53314 | TETRATRICOPEPTIDE REPEAT PROTEIN 6 |
| Paelopatides53315 | |
| Paelopatides53316 | 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR |
| Paelopatides53317 | NETRIN/LAMININ-RELATED |
| Paelopatides53318 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53319 | |
| Paelopatides53320 | |
| Paelopatides53321 | PROTEIN CBG26694 |
| Paelopatides53322 | NEPHRIN |
| Paelopatides53323 | PIKACHURIN-LIKE PROTEIN |
| Paelopatides53324 | FI04643P-RELATED |
| Paelopatides53325 | FI04643P-RELATED |
| Paelopatides53326 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides53327 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53328 | |
| Paelopatides53329 | FI04643P-RELATED |
| Paelopatides53330 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 |
| Paelopatides53331 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
| Paelopatides53332 | |
| Paelopatides53333 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
| Paelopatides53334 | |
| Paelopatides53335 | ALDEHYDE DEHYDROGENASE-RELATED |
| Paelopatides53336 | |
| Paelopatides53337 |
