The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53392 | |
Paelopatides53393 | DISEASE RESISTANCE PROTEIN RP |
Paelopatides53394 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53395 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
Paelopatides53396 | POL PROTEIN |
Paelopatides53397 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
Paelopatides53398 | |
Paelopatides53399 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides53400 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides53401 | ENDONUCLEASE-RELATED |
Paelopatides53402 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
Paelopatides53403 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53404 | CST COMPLEX SUBUNIT TEN1 |
Paelopatides53405 | UNCHARACTERIZED |
Paelopatides53406 | |
Paelopatides53407 | |
Paelopatides53408 | GTP-BINDING |
Paelopatides53409 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides53410 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides53411 | SI:DKEY-122A22.2 |
Paelopatides53412 | RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN |
Paelopatides53413 | AGAP011099-PA |
Paelopatides53414 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides53415 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
Paelopatides53416 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53417 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53418 | |
Paelopatides53419 | PHOSPHATASE WITH HOMOLOGY TO TENSIN |
Paelopatides53420 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
Paelopatides53421 | UNCHARACTERIZED |
Paelopatides53422 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
Paelopatides53423 | PROTEIN MAELSTROM HOMOLOG |
Paelopatides53424 | |
Paelopatides53425 | NETRIN RECEPTOR UNC5 |
Paelopatides53426 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Paelopatides53427 | |
Paelopatides53428 | DNA POLYMERASE |
Paelopatides53429 | |
Paelopatides53430 | |
Paelopatides53431 | UNCHARACTERIZED |
Paelopatides53432 | PROTEIN, PUTATIVE-RELATED |
Paelopatides53433 | PARANEOPLASTIC ANTIGEN |
Paelopatides53434 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53435 | |
Paelopatides53436 | OS04G0629600 PROTEIN |
Paelopatides53437 | |
Paelopatides53438 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53439 | |
Paelopatides53440 | PARANEOPLASTIC ANTIGEN |
Paelopatides53441 | POL PROTEIN |