The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53338 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides53339 | |
Paelopatides53340 | V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A |
Paelopatides53341 | ATP7, ISOFORM B |
Paelopatides53342 | WD REPEAT-CONTAINING PROTEIN 55 |
Paelopatides53343 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
Paelopatides53344 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
Paelopatides53345 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
Paelopatides53346 | UNCHARACTERIZED |
Paelopatides53347 | VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 |
Paelopatides53348 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides53349 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides53350 | PROTEIN EVA-1 |
Paelopatides53351 | - |
Paelopatides53352 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides53353 | |
Paelopatides53354 | TYROSINE-PROTEIN KINASE |
Paelopatides53355 | BARDET-BIEDL SYNDROME PROTEIN 5 |
Paelopatides53356 | TRANSPOSON |
Paelopatides53357 | SHUGOSHIN |
Paelopatides53359 | |
Paelopatides53360 | POU DOMAIN |
Paelopatides53361 | |
Paelopatides53362 | |
Paelopatides53363 | |
Paelopatides53364 | RETROTRANSPOSON |
Paelopatides53365 | |
Paelopatides53366 | |
Paelopatides53367 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53368 | BUCENTAUR RELATED |
Paelopatides53369 | |
Paelopatides53370 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53371 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides53372 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Paelopatides53373 | |
Paelopatides53374 | |
Paelopatides53376 | |
Paelopatides53377 | BONUS, ISOFORM C-RELATED |
Paelopatides53378 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53379 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
Paelopatides53382 | PROTEIN CBG26694 |
Paelopatides53383 | PROTEIN CBG26694 |
Paelopatides53384 | ATP-BINDING CASSETTE SUB-FAMILY C |
Paelopatides53385 | KINETOCHORE-ASSOCIATED PROTEIN NSL1 HOMOLOG |
Paelopatides53386 | SI:CH211-196P9.1-RELATED |
Paelopatides53387 | IP13529P |
Paelopatides53388 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides53389 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53390 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
Paelopatides53391 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |