The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides53542 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53543 | |
| Paelopatides53544 | PROTEIN NJMU-R1 |
| Paelopatides53545 | DYNEIN INTERMEDIATE CHAIN |
| Paelopatides53546 | AP-5 COMPLEX SUBUNIT ZETA-1 |
| Paelopatides53547 | AP-5 COMPLEX SUBUNIT ZETA-1 |
| Paelopatides53548 | CYCLINS |
| Paelopatides53549 | |
| Paelopatides53550 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
| Paelopatides53551 | |
| Paelopatides53552 | |
| Paelopatides53553 | TNF RECEPTOR ASSOCIATED FACTOR |
| Paelopatides53554 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides53555 | |
| Paelopatides53556 | |
| Paelopatides53557 | |
| Paelopatides53558 | |
| Paelopatides53559 | |
| Paelopatides53560 | |
| Paelopatides53561 | DNA POLYMERASE |
| Paelopatides53562 | HIGH MOBILITY GROUP PROTEIN DSP1 |
| Paelopatides53563 | |
| Paelopatides53564 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53565 | CERAMIDE GLUCOSYLTRANSFERASE |
| Paelopatides53566 | |
| Paelopatides53567 | |
| Paelopatides53568 | |
| Paelopatides53569 | |
| Paelopatides53570 | REVERSE TRANSCRIPTASES |
| Paelopatides53571 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides53572 | SNF2/RAD54 FAMILY MEMBER |
| Paelopatides53573 | |
| Paelopatides53574 | ENDONUCLEASE-RELATED |
| Paelopatides53575 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides53576 | PROTEIN CBG26694 |
| Paelopatides53577 | ION_TRANS DOMAIN-CONTAINING PROTEIN |
| Paelopatides53578 | FACIOGENITAL DYSPLASIA PROTEIN |
| Paelopatides53579 | POLYAMINE-MODULATED FACTOR 1 |
| Paelopatides53580 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides53581 | |
| Paelopatides53583 | |
| Paelopatides53584 | |
| Paelopatides53585 | PROTEIN CBG26694 |
| Paelopatides53586 | |
| Paelopatides53587 | |
| Paelopatides53588 | DNA-BINDING PROTEIN SATB FAMILY MEMBER |
| Paelopatides53589 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
| Paelopatides53590 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides53591 | PROTEIN CBG26694 |
| Paelopatides53592 | PROTEIN CBG26694 |
