About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53694ETS
Paelopatides53695REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53696TITIN
Paelopatides53697NETRIN RECEPTOR UNC5
Paelopatides53698
Paelopatides53699LP04239P
Paelopatides53700
Paelopatides53701
Paelopatides53702REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53703PROTEIN CBG26694
Paelopatides53704ZGC:101858
Paelopatides53705SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides53706
Paelopatides53707SJOEGREN SYNDROME/SCLERODERMA AUTOANTIGEN 1
Paelopatides53708TANDEM PH DOMAIN CONTAINING PROTEIN
Paelopatides53709
Paelopatides53710HYPOTHETICAL PROTEIN LOC691189
Paelopatides53711ARMADILLO-TYPE FOLD-RELATED
Paelopatides53712RETROTRANSPOSON
Paelopatides53713
Paelopatides53714PROTEIN CBG26694
Paelopatides53715FERRITIN
Paelopatides53716
Paelopatides53717MALATE AND LACTATE DEHYDROGENASE
Paelopatides53718PHD FINGER PROTEIN 12
Paelopatides53719TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6
Paelopatides53720RING FINGER 10 FAMILY MEMBER
Paelopatides53721CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53722
Paelopatides53723
Paelopatides53724PROTEIN CBG23806
Paelopatides53725
Paelopatides53726
Paelopatides53727
Paelopatides53728CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53729PROTEIN CBG26694
Paelopatides53730
Paelopatides53731-
Paelopatides53732CYSTATIN FAMILY MEMBER
Paelopatides53733PROTEIN CBG26694
Paelopatides53734
Paelopatides53735
Paelopatides53736
Paelopatides53737GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides53738
Paelopatides53739
Paelopatides53740
Paelopatides53741DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides53742COMPLEMENT FACTOR H-RELATED
Paelopatides53743COMPLEMENT FACTOR H-RELATED
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