The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53744 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
Paelopatides53745 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
Paelopatides53746 | |
Paelopatides53748 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Paelopatides53749 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Paelopatides53750 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides53751 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Paelopatides53752 | |
Paelopatides53753 | |
Paelopatides53754 | |
Paelopatides53755 | |
Paelopatides53756 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides53757 | POLYCOMB PROTEIN |
Paelopatides53758 | NADH-UBIQUINONE OXIDOREDUCTASE B15 SUBUNIT |
Paelopatides53759 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Paelopatides53760 | |
Paelopatides53761 | |
Paelopatides53762 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Paelopatides53763 | |
Paelopatides53764 | NOTCH LIGAND FAMILY MEMBER |
Paelopatides53765 | |
Paelopatides53766 | |
Paelopatides53767 | |
Paelopatides53772 | |
Paelopatides53773 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53774 | BUCENTAUR RELATED |
Paelopatides53775 | THO COMPLEX SUBUNIT 6 HOMOLOG |
Paelopatides53776 | ZGC:101858 |
Paelopatides53777 | ZGC:101858 |
Paelopatides53778 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides53779 | PROTEIN CBG26694 |
Paelopatides53780 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides53781 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53782 | ENDONUCLEASE |
Paelopatides53783 | ATP-DEPENDENT RNA HELICASE |
Paelopatides53784 | |
Paelopatides53785 | |
Paelopatides53786 | E1A-BINDING PROTEIN P400-RELATED |
Paelopatides53787 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53788 | HELICASE SRCAP-RELATED |
Paelopatides53789 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides53790 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides53791 | PROTEIN CBG26694 |
Paelopatides53792 | PROTEIN CBG26694 |
Paelopatides53793 | LD33804P |
Paelopatides53794 | AGAP004733-PA |
Paelopatides53795 | |
Paelopatides53796 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
Paelopatides53797 | - |
Paelopatides53798 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |