About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53903THIOESTERASE SUPERFAMILY MEMBER-RELATED
Paelopatides53904THIOESTERASE SUPERFAMILY MEMBER-RELATED
Paelopatides53905UNCHARACTERIZED
Paelopatides53906
Paelopatides53907REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53908SPERMATOGENESIS-ASSOCIATED PROTEIN 24
Paelopatides53909WD40 REPEAT PF20
Paelopatides53910
Paelopatides53911
Paelopatides53912G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN
Paelopatides53913G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN
Paelopatides53914BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides53915OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides53916TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides53917REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53918GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53919GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53920GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53921GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53922NXPE FAMILY MEMBER
Paelopatides53923GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53924ZINC FINGER PROTEIN 142
Paelopatides53925-
Paelopatides53926
Paelopatides53927-
Paelopatides53928LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN
Paelopatides53929TRANSCRIPTIONAL ADAPTER 1
Paelopatides53930DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
Paelopatides53931REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53932EPM2A-INTERACTING PROTEIN 1
Paelopatides53933NITRIC OXIDE SYNTHASE-RELATED
Paelopatides53934FORMIN-LIKE PROTEIN
Paelopatides53935NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides53936
Paelopatides53937BIOTINIDASE-RELATED
Paelopatides53938
Paelopatides53939PROTEIN CBG26694
Paelopatides53940NETRIN RECEPTOR UNC5
Paelopatides53941SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Paelopatides53942SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Paelopatides53943ZINC FINGER PROTEIN 106
Paelopatides53944
Paelopatides53945
Paelopatides53946
Paelopatides53947REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53948SYNAPTOSOMAL ASSOCIATED PROTEIN
Paelopatides53949HELICASE
Paelopatides53950
Paelopatides53951SYNAPTOSOMAL ASSOCIATED PROTEIN
Paelopatides53952
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