The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides54007 | |
Paelopatides54008 | PROTEIN CBG26694 |
Paelopatides54009 | PROTEIN CBG26694 |
Paelopatides54010 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
Paelopatides54011 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54012 | |
Paelopatides54013 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides54014 | |
Paelopatides54015 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54017 | DIMETHYLANILINE MONOOXYGENASE |
Paelopatides54018 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides54019 | |
Paelopatides54020 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54021 | DIMETHYLANILINE MONOOXYGENASE |
Paelopatides54022 | COPROPORPHYRINIGEN III OXIDASE |
Paelopatides54023 | COPROPORPHYRINIGEN III OXIDASE |
Paelopatides54024 | KINESIN LIGHT CHAIN |
Paelopatides54025 | |
Paelopatides54026 | PROTEIN CBG26694 |
Paelopatides54027 | FATTY ACID ACYL TRANSFERASE-RELATED |
Paelopatides54028 | UNCHARACTERIZED |
Paelopatides54029 | SPERM-SPECIFIC FAMILY, CLASS Q |
Paelopatides54030 | |
Paelopatides54031 | |
Paelopatides54032 | |
Paelopatides54033 | SKELETOR-RELATED |
Paelopatides54034 | CRUMBS FAMILY MEMBER |
Paelopatides54035 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides54036 | |
Paelopatides54037 | TRANSPOSON |
Paelopatides54038 | |
Paelopatides54039 | |
Paelopatides54040 | |
Paelopatides54041 | |
Paelopatides54042 | GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 |
Paelopatides54043 | |
Paelopatides54044 | |
Paelopatides54045 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54046 | |
Paelopatides54047 | |
Paelopatides54048 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54049 | REVERSE TRANSCRIPTASES |
Paelopatides54050 | PROTEIN CBG26694 |
Paelopatides54051 | ENDONUCLEASE-RELATED |
Paelopatides54052 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides54053 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 |
Paelopatides54054 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides54057 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides54058 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides54059 |