About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54007
Paelopatides54008PROTEIN CBG26694
Paelopatides54009PROTEIN CBG26694
Paelopatides54010FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE
Paelopatides54011SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54012
Paelopatides54013SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides54014
Paelopatides54015SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54017DIMETHYLANILINE MONOOXYGENASE
Paelopatides54018TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides54019
Paelopatides54020REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54021DIMETHYLANILINE MONOOXYGENASE
Paelopatides54022COPROPORPHYRINIGEN III OXIDASE
Paelopatides54023COPROPORPHYRINIGEN III OXIDASE
Paelopatides54024KINESIN LIGHT CHAIN
Paelopatides54025
Paelopatides54026PROTEIN CBG26694
Paelopatides54027FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides54028UNCHARACTERIZED
Paelopatides54029SPERM-SPECIFIC FAMILY, CLASS Q
Paelopatides54030
Paelopatides54031
Paelopatides54032
Paelopatides54033SKELETOR-RELATED
Paelopatides54034CRUMBS FAMILY MEMBER
Paelopatides54035ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides54036
Paelopatides54037TRANSPOSON
Paelopatides54038
Paelopatides54039
Paelopatides54040
Paelopatides54041
Paelopatides54042GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2
Paelopatides54043
Paelopatides54044
Paelopatides54045PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides54046
Paelopatides54047
Paelopatides54048REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54049REVERSE TRANSCRIPTASES
Paelopatides54050PROTEIN CBG26694
Paelopatides54051ENDONUCLEASE-RELATED
Paelopatides54052FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54053TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9
Paelopatides54054INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides54057FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54058FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54059
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