The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53799 | |
Paelopatides53800 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Paelopatides53801 | |
Paelopatides53802 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
Paelopatides53803 | AGAP008170-PA |
Paelopatides53804 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides53805 | TYROSINE-PROTEIN KINASE |
Paelopatides53806 | HISTONE DEACETYLASE HDAC1-RELATED |
Paelopatides53807 | |
Paelopatides53808 | GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL |
Paelopatides53809 | NXPE FAMILY MEMBER |
Paelopatides53811 | SULFITE REDUCTASE |
Paelopatides53812 | SULFITE REDUCTASE |
Paelopatides53813 | |
Paelopatides53814 | RRM DOMAIN-CONTAINING PROTEIN |
Paelopatides53815 | TRANSFORMING GROWTH FACTOR ALPHA |
Paelopatides53816 | FIBRILLIN-RELATED |
Paelopatides53817 | ENDONUCLEASE-RELATED |
Paelopatides53818 | |
Paelopatides53819 | POL PROTEIN |
Paelopatides53820 | |
Paelopatides53821 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides53822 | MUCIN 4-RELATED |
Paelopatides53823 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53824 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53825 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53826 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53827 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Paelopatides53828 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53829 | |
Paelopatides53830 | MONOCARBOXYLATE TRANSPORTER |
Paelopatides53831 | |
Paelopatides53832 | |
Paelopatides53833 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides53835 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides53836 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides53837 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides53838 | PROTEIN CBG26694 |
Paelopatides53839 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53840 | |
Paelopatides53841 | |
Paelopatides53842 | PROFILIN |
Paelopatides53843 | |
Paelopatides53844 | RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED |
Paelopatides53845 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53846 | MUCIN 26B |
Paelopatides53847 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides53848 | |
Paelopatides53849 | |
Paelopatides53850 |