About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53593
Paelopatides53594LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides53595
Paelopatides53596DYNAMIN
Paelopatides53597-
Paelopatides53598DYNAMIN
Paelopatides53599UNCHARACTERIZED
Paelopatides53600INTERFERON ALPHA-INDUCIBLE PROTEIN 27
Paelopatides53601FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides53602
Paelopatides53603BONUS, ISOFORM C-RELATED
Paelopatides53604KREMEN PROTEIN
Paelopatides53605REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53606GH03947P
Paelopatides53607SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides53608ENDONUCLEASE
Paelopatides53609DNA-DIRECTED RNA POLYMERASE SUBUNIT K
Paelopatides53610ASSOCIATE OF C-MYC AMY-1
Paelopatides53611TUBULIN
Paelopatides53612TUBULIN
Paelopatides53613PROTEIN CBG26694
Paelopatides53614NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides53615APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides53616
Paelopatides53617
Paelopatides53618
Paelopatides53619SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53620T-CELL SURFACE GLYCOPROTEIN CD4
Paelopatides53621E3 UBIQUITIN-PROTEIN LIGASE TM129
Paelopatides53622SERINE PROTEASE FAMILY S1C HTRA-RELATED
Paelopatides53623-
Paelopatides53624CELL DIVISION CYCLE 16,23,27
Paelopatides53625CELL DIVISION CYCLE 16,23,27
Paelopatides53626EPM2A-INTERACTING PROTEIN 1
Paelopatides53627EPM2A-INTERACTING PROTEIN 1
Paelopatides53628
Paelopatides53629TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides53630IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides53631
Paelopatides53632
Paelopatides53633
Paelopatides53634IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides53635
Paelopatides53636PROTEIN CBG26694
Paelopatides53637PROTEIN CBG26694
Paelopatides53638REVERSE TRANSCRIPTASES
Paelopatides53639HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides53640PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4
Paelopatides53641PRE-MRNA SPLICING FACTOR-RELATED
Paelopatides53642E3 UBIQUITIN-PROTEIN LIGASE RAD18
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