The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53643 | E3 UBIQUITIN-PROTEIN LIGASE RAD18 |
Paelopatides53644 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides53645 | |
Paelopatides53646 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53647 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53648 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
Paelopatides53649 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
Paelopatides53650 | ENDONUCLEASE-RELATED |
Paelopatides53651 | POL PROTEIN |
Paelopatides53652 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
Paelopatides53653 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides53654 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides53655 | |
Paelopatides53656 | POL PROTEIN |
Paelopatides53657 | |
Paelopatides53658 | ENDONUCLEASE-RELATED |
Paelopatides53659 | |
Paelopatides53660 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53661 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides53662 | POL PROTEIN |
Paelopatides53663 | FI04643P-RELATED |
Paelopatides53664 | MORN REPEAT-CONTAINING PROTEIN 2 |
Paelopatides53665 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53666 | |
Paelopatides53668 | NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 |
Paelopatides53669 | NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 |
Paelopatides53670 | PROTEIN CBG26694 |
Paelopatides53671 | |
Paelopatides53672 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Paelopatides53673 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53674 | |
Paelopatides53675 | - |
Paelopatides53676 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Paelopatides53677 | RIKEN CDNA D130052B06 GENE |
Paelopatides53678 | |
Paelopatides53679 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides53680 | |
Paelopatides53681 | |
Paelopatides53682 | |
Paelopatides53683 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides53684 | |
Paelopatides53685 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53686 | |
Paelopatides53687 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides53688 | CYTOCHROME P450 508A4-RELATED |
Paelopatides53689 | |
Paelopatides53690 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
Paelopatides53691 | RIKEN CDNA D130052B06 GENE |
Paelopatides53692 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53693 |