The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides53851 | |
Paelopatides53852 | |
Paelopatides53853 | O-METHYLTRANSFERASE-RELATED |
Paelopatides53854 | PROTEIN CBG26694 |
Paelopatides53855 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides53856 | BUCENTAUR RELATED |
Paelopatides53857 | MYOSIN LIGHT CHAIN 1, 3 |
Paelopatides53858 | |
Paelopatides53859 | ANOCTAMIN |
Paelopatides53860 | |
Paelopatides53861 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides53864 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Paelopatides53865 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Paelopatides53866 | LD39211P |
Paelopatides53867 | CYTOSOLIC CARBOXYPEPTIDASE |
Paelopatides53868 | |
Paelopatides53869 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53870 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides53871 | BUCENTAUR RELATED |
Paelopatides53872 | |
Paelopatides53873 | |
Paelopatides53874 | T-CELL IMMUNOMODULATORY PROTEIN HOMOLOG |
Paelopatides53875 | - |
Paelopatides53876 | FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I |
Paelopatides53877 | PROTEIN DIAPHANOUS |
Paelopatides53878 | FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I |
Paelopatides53879 | FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I |
Paelopatides53880 | FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I |
Paelopatides53881 | |
Paelopatides53882 | |
Paelopatides53883 | MUCIN 4-RELATED |
Paelopatides53884 | |
Paelopatides53885 | |
Paelopatides53886 | MUCIN 4-RELATED |
Paelopatides53887 | |
Paelopatides53888 | FAMILY WITH SEQUENCE SIMILARITY 102 |
Paelopatides53889 | TRANSFERRIN |
Paelopatides53890 | |
Paelopatides53891 | TRANSFERRIN |
Paelopatides53892 | ATP-DEPENDENT RNA HELICASE |
Paelopatides53893 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Paelopatides53894 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Paelopatides53895 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides53896 | |
Paelopatides53897 | NETRIN/LAMININ-RELATED |
Paelopatides53898 | |
Paelopatides53899 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides53900 | |
Paelopatides53901 | PROTEIN CBG26694 |
Paelopatides53902 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |