About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54163
Paelopatides54164
Paelopatides54165
Paelopatides54167HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1
Paelopatides54168VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
Paelopatides54169CADHERIN-23
Paelopatides54170CADHERIN-23
Paelopatides54171PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54172DESMOGLEIN FAMILY MEMBER
Paelopatides54173PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides54174
Paelopatides54175RETROTRANSPOSON
Paelopatides54176RETROTRANSPOSON
Paelopatides54177PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides54178
Paelopatides54179TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides54180ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54181CYTOCHROME P450 508A4-RELATED
Paelopatides54182PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides54183GH04942P
Paelopatides54184CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
Paelopatides54185PROTEIN FAM183B
Paelopatides54186RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED
Paelopatides54187FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54188FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54189REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54190ADDUCIN
Paelopatides54191ADDUCIN
Paelopatides54192
Paelopatides54193ADDUCIN
Paelopatides54194
Paelopatides54195
Paelopatides54196-
Paelopatides54197ABRAXAS FAMILY MEMBER
Paelopatides54198PEPTIDASE S8
Paelopatides54199HUNTINGTON DISEASE PROTEIN
Paelopatides54200
Paelopatides54201PHOSPHATIDYLINOSITOL KINASE
Paelopatides54202CHITIN-BINDING TYPE-4 DOMAIN-CONTAINING PROTEIN
Paelopatides54203LD39211P
Paelopatides54205
Paelopatides54206NUDIX HYDROLASE
Paelopatides54207UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides54208
Paelopatides54209MRG-BINDING PROTEIN
Paelopatides54210
Paelopatides54211PROTEASOME SUBUNIT ALPHA/BETA
Paelopatides54212RETINOVIN-RELATED
Paelopatides54213
Paelopatides54214TRANSAMIDASE
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