About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54317BUCENTAUR RELATED
Paelopatides54318
Paelopatides54319FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54320ENDONUCLEASE-RELATED
Paelopatides54321
Paelopatides54322
Paelopatides54323
Paelopatides54324CLASP
Paelopatides54325
Paelopatides54326CLASP
Paelopatides54327DYMECLIN
Paelopatides54328DYMECLIN
Paelopatides54329PNAS-3 RELATED
Paelopatides54330PNAS-3 RELATED
Paelopatides54331
Paelopatides54332F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54336
Paelopatides54337HEPARANASE
Paelopatides54338
Paelopatides54339PROTEIN SIDEKICK
Paelopatides54340GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Paelopatides54341GUANYLYL CYCLASE
Paelopatides54342PROTEIN CBG26694
Paelopatides54343NUCLEAR HORMONE RECEPTOR HR3-RELATED
Paelopatides54344EPM2A-INTERACTING PROTEIN 1
Paelopatides54345PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides54346
Paelopatides54347
Paelopatides54349FI18240P1-RELATED
Paelopatides54350PROTEIN CBG26694
Paelopatides54351GTP-BINDING
Paelopatides54352TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA
Paelopatides54353POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
Paelopatides54354SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Paelopatides54355BONUS, ISOFORM C-RELATED
Paelopatides54356UNCHARACTERIZED
Paelopatides54357S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides54358KELCH PROTEIN
Paelopatides54359SERINE/THREONINE-PROTEIN KINASE RIO1
Paelopatides54360
Paelopatides54361L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides54362
Paelopatides54363
Paelopatides54364
Paelopatides54365DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Paelopatides54366
Paelopatides54367CENTROSOMAL PROTEIN OF 170 KDA
Paelopatides54368SERINE/THREONINE-PROTEIN KINASE TAO
Paelopatides54369
Paelopatides54370SERINE/THREONINE-PROTEIN KINASE TAO
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