The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides54371 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54372 | |
| Paelopatides54373 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides54374 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides54375 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides54376 | NUCLEAR RESPIRATORY FACTOR 1 |
| Paelopatides54377 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| Paelopatides54378 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides54387 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| Paelopatides54390 | |
| Paelopatides54391 | BUCENTAUR RELATED |
| Paelopatides54392 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Paelopatides54393 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
| Paelopatides54394 | LEUCOKININ RECEPTOR-RELATED |
| Paelopatides54395 | CULLIN |
| Paelopatides54396 | TROPOMODULIN |
| Paelopatides54397 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Paelopatides54398 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides54399 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
| Paelopatides54400 | |
| Paelopatides54401 | |
| Paelopatides54402 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11 |
| Paelopatides54403 | PROTEIN CBG18333 |
| Paelopatides54404 | |
| Paelopatides54405 | TRANSPOSON |
| Paelopatides54406 | |
| Paelopatides54407 | SMAD |
| Paelopatides54408 | |
| Paelopatides54409 | ADP-RIBOSYLGLYCOHYDROLASE |
| Paelopatides54410 | |
| Paelopatides54411 | D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| Paelopatides54412 | D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| Paelopatides54413 | |
| Paelopatides54414 | PROTEIN CBG26694 |
| Paelopatides54415 | |
| Paelopatides54416 | METABOTROPIC GLUTAMATE RECEPTOR |
| Paelopatides54417 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides54418 | |
| Paelopatides54419 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides54420 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides54421 | |
| Paelopatides54422 | INTIMAL THICKNESS RECEPTOR-RELATED |
| Paelopatides54423 | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 |
| Paelopatides54424 | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 |
| Paelopatides54425 | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 |
| Paelopatides54426 | UNCHARACTERIZED DUF1167 |
| Paelopatides54428 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides54429 | UNCHARACTERIZED DUF1167 |
| Paelopatides54430 | |
| Paelopatides54431 | VACUOLAR PROTON ATPASES |
