The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides54484 | PROTEIN CBG26694 |
Paelopatides54486 | FATTY ACID ACYL TRANSFERASE-RELATED |
Paelopatides54487 | - |
Paelopatides54490 | HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H |
Paelopatides54491 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Paelopatides54492 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Paelopatides54493 | REVERSE TRANSCRIPTASES |
Paelopatides54494 | CENTROSOMAL PROTEIN 2 |
Paelopatides54495 | TRNA DIMETHYLALLYLTRANSFERASE |
Paelopatides54496 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
Paelopatides54497 | RAS-LIKE FAMILY MEMBER 11 |
Paelopatides54498 | METABOTROPIC GLUTAMATE RECEPTOR |
Paelopatides54499 | METABOTROPIC GLUTAMATE RECEPTOR |
Paelopatides54500 | ANKYRIN REPEAT FAMILY PROTEIN |
Paelopatides54503 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides54504 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides54505 | |
Paelopatides54506 | |
Paelopatides54507 | DOUBLECORTIN DOMAIN CONTAINING 2 |
Paelopatides54508 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Paelopatides54509 | MIP31509P |
Paelopatides54510 | |
Paelopatides54511 | PROTEIN CBG10425 |
Paelopatides54512 | PROTEIN CBG10425 |
Paelopatides54513 | |
Paelopatides54514 | GTP-BINDING |
Paelopatides54515 | |
Paelopatides54516 | |
Paelopatides54517 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Paelopatides54518 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54519 | - |
Paelopatides54520 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54521 | |
Paelopatides54522 | BUCENTAUR RELATED |
Paelopatides54523 | CARBOXYLIC ESTER HYDROLASE |
Paelopatides54524 | CARBOXYLIC ESTER HYDROLASE |
Paelopatides54525 | GAG-RELATED PROTEIN |
Paelopatides54526 | |
Paelopatides54527 | |
Paelopatides54528 | |
Paelopatides54529 | |
Paelopatides54530 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides54531 | |
Paelopatides54532 | |
Paelopatides54533 | EXPRESSED PROTEIN |
Paelopatides54534 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54535 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54536 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54537 | |
Paelopatides54538 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |