About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54484PROTEIN CBG26694
Paelopatides54486FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides54487-
Paelopatides54490HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H
Paelopatides54491SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides54492SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides54493REVERSE TRANSCRIPTASES
Paelopatides54494CENTROSOMAL PROTEIN 2
Paelopatides54495TRNA DIMETHYLALLYLTRANSFERASE
Paelopatides54496DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides54497RAS-LIKE FAMILY MEMBER 11
Paelopatides54498METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides54499METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides54500ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides54503L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides54504ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54505
Paelopatides54506
Paelopatides54507DOUBLECORTIN DOMAIN CONTAINING 2
Paelopatides54508SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides54509MIP31509P
Paelopatides54510
Paelopatides54511PROTEIN CBG10425
Paelopatides54512PROTEIN CBG10425
Paelopatides54513
Paelopatides54514GTP-BINDING
Paelopatides54515
Paelopatides54516
Paelopatides54517LONG-CHAIN-FATTY-ACID--COA LIGASE
Paelopatides54518REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54519-
Paelopatides54520REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54521
Paelopatides54522BUCENTAUR RELATED
Paelopatides54523CARBOXYLIC ESTER HYDROLASE
Paelopatides54524CARBOXYLIC ESTER HYDROLASE
Paelopatides54525GAG-RELATED PROTEIN
Paelopatides54526
Paelopatides54527
Paelopatides54528
Paelopatides54529
Paelopatides54530FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides54531
Paelopatides54532
Paelopatides54533EXPRESSED PROTEIN
Paelopatides54534REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54535REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54536REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54537
Paelopatides54538CXC DOMAIN-CONTAINING PROTEIN-RELATED
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