The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides54645 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54646 | |
Paelopatides54647 | |
Paelopatides54648 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides54649 | RETROTRANSPOSON |
Paelopatides54650 | PLEXIN |
Paelopatides54651 | PLEXIN |
Paelopatides54652 | ENDONUCLEASE-RELATED |
Paelopatides54653 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54654 | |
Paelopatides54655 | FTP DOMAIN-CONTAINING PROTEIN |
Paelopatides54656 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54657 | HYPOTHETICAL CYTOSOLIC PROTEIN |
Paelopatides54658 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54659 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides54660 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides54661 | SH2B ADAPTER PROTEIN |
Paelopatides54662 | SH2B ADAPTER PROTEIN |
Paelopatides54663 | AP1 GAMMA SUBUNIT BINDING PROTEIN 1 |
Paelopatides54664 | IP13529P |
Paelopatides54665 | |
Paelopatides54666 | PLEXIN |
Paelopatides54667 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54668 | UNCHARACTERIZED |
Paelopatides54669 | AGAP001331-PA-RELATED |
Paelopatides54670 | |
Paelopatides54671 | PHOSPHOLIPASE A2 FAMILY MEMBER |
Paelopatides54672 | |
Paelopatides54673 | SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20 |
Paelopatides54674 | GUANYLATE KINASE-RELATED |
Paelopatides54675 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54676 | |
Paelopatides54677 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides54678 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides54679 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
Paelopatides54680 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
Paelopatides54681 | |
Paelopatides54682 | |
Paelopatides54683 | COUNTIN RECEPTOR CNR3-RELATED |
Paelopatides54684 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides54685 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54686 | PROTEIN CBG26694 |
Paelopatides54687 | ACETYLCHOLINESTERASE |
Paelopatides54688 | |
Paelopatides54689 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Paelopatides54690 | BONUS, ISOFORM C-RELATED |
Paelopatides54691 | OUTER DENSE FIBER OF SPERM TAILS 2 |
Paelopatides54692 | |
Paelopatides54693 | |
Paelopatides54694 |