The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides54797 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
Paelopatides54798 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides54799 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54800 | BUCENTAUR RELATED |
Paelopatides54801 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54802 | TYROSINE-PROTEIN KINASE |
Paelopatides54803 | PATCHED-RELATED |
Paelopatides54804 | |
Paelopatides54805 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Paelopatides54806 | |
Paelopatides54807 | |
Paelopatides54808 | PROTEASOME SUBUNIT ALPHA/BETA |
Paelopatides54809 | |
Paelopatides54810 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides54811 | |
Paelopatides54812 | |
Paelopatides54813 | SOLUTE CARRIER FAMILY 39 |
Paelopatides54814 | |
Paelopatides54815 | |
Paelopatides54816 | |
Paelopatides54817 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Paelopatides54818 | |
Paelopatides54819 | BUCENTAUR RELATED |
Paelopatides54820 | |
Paelopatides54821 | |
Paelopatides54822 | GAG-RELATED PROTEIN |
Paelopatides54823 | |
Paelopatides54824 | COILED-COIL DOMAIN CONTAINING 198 |
Paelopatides54825 | TGF-BETA FAMILY |
Paelopatides54826 | NUCLEAR EXPORT MEDIATOR FACTOR NEMF |
Paelopatides54827 | |
Paelopatides54828 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54829 | NUCLEAR EXPORT MEDIATOR FACTOR NEMF |
Paelopatides54830 | |
Paelopatides54831 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54832 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54833 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54834 | |
Paelopatides54835 | |
Paelopatides54836 | |
Paelopatides54837 | YALI0C04136P |
Paelopatides54838 | SPERMATOGENESIS-ASSOCIATED PROTEIN 6 SPATA6 |
Paelopatides54839 | DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN |
Paelopatides54840 | PROTEIN, PUTATIVE-RELATED |
Paelopatides54841 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides54842 | |
Paelopatides54843 | |
Paelopatides54844 | LP04239P |
Paelopatides54845 | |
Paelopatides54846 | LP04239P |