About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54947PROTEIN CBG26694
Paelopatides54948T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Paelopatides54949KREV INTERACTION TRAPPED 1-RELATED
Paelopatides54950
Paelopatides54951
Paelopatides54952
Paelopatides54953TUBULIN POLYGLUTAMYLASE
Paelopatides54954MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides54955PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54956
Paelopatides54958GABA-B RECEPTOR
Paelopatides54960
Paelopatides54961
Paelopatides54962
Paelopatides54963DUAL SPECIFICITY PROTEIN KINASE
Paelopatides54964-
Paelopatides54965
Paelopatides54967
Paelopatides54968
Paelopatides54969NUCLEOPORIN AMO1-LIKE
Paelopatides54970
Paelopatides54971TRANSPOSON
Paelopatides54972PROTEIN CBG26694
Paelopatides54973PARANEOPLASTIC ANTIGEN
Paelopatides54974ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER
Paelopatides54975SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL
Paelopatides54976
Paelopatides54977
Paelopatides54978
Paelopatides54979
Paelopatides54980G-PROTEIN COUPLED RECEPTOR
Paelopatides54981DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11
Paelopatides54982DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11
Paelopatides54983PROTEIN CBG26694
Paelopatides54984ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides54985DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11
Paelopatides54986DEOXYRIBONUCLEASE TATDN2-RELATED
Paelopatides54987ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides54988ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides54989REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54990NUCLEAR PROTEIN MDM1
Paelopatides54991DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides54992DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides54993DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides54994DYNEIN HEAVY CHAIN
Paelopatides54995PROTEIN CBG26694
Paelopatides54996
Paelopatides54997
Paelopatides54998
Paelopatides54999PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
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