The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides54947 | PROTEIN CBG26694 |
Paelopatides54948 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
Paelopatides54949 | KREV INTERACTION TRAPPED 1-RELATED |
Paelopatides54950 | |
Paelopatides54951 | |
Paelopatides54952 | |
Paelopatides54953 | TUBULIN POLYGLUTAMYLASE |
Paelopatides54954 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides54955 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides54956 | |
Paelopatides54958 | GABA-B RECEPTOR |
Paelopatides54960 | |
Paelopatides54961 | |
Paelopatides54962 | |
Paelopatides54963 | DUAL SPECIFICITY PROTEIN KINASE |
Paelopatides54964 | - |
Paelopatides54965 | |
Paelopatides54967 | |
Paelopatides54968 | |
Paelopatides54969 | NUCLEOPORIN AMO1-LIKE |
Paelopatides54970 | |
Paelopatides54971 | TRANSPOSON |
Paelopatides54972 | PROTEIN CBG26694 |
Paelopatides54973 | PARANEOPLASTIC ANTIGEN |
Paelopatides54974 | ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER |
Paelopatides54975 | SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL |
Paelopatides54976 | |
Paelopatides54977 | |
Paelopatides54978 | |
Paelopatides54979 | |
Paelopatides54980 | G-PROTEIN COUPLED RECEPTOR |
Paelopatides54981 | DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 |
Paelopatides54982 | DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 |
Paelopatides54983 | PROTEIN CBG26694 |
Paelopatides54984 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides54985 | DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 |
Paelopatides54986 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Paelopatides54987 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54988 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54989 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54990 | NUCLEAR PROTEIN MDM1 |
Paelopatides54991 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Paelopatides54992 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Paelopatides54993 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Paelopatides54994 | DYNEIN HEAVY CHAIN |
Paelopatides54995 | PROTEIN CBG26694 |
Paelopatides54996 | |
Paelopatides54997 | |
Paelopatides54998 | |
Paelopatides54999 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |