About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55101
Paelopatides55102
Paelopatides55103FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides551048-OXOGUANINE DNA GLYCOSYLASE
Paelopatides55105
Paelopatides55106GTP-BINDING
Paelopatides55107CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55108
Paelopatides55109
Paelopatides55110GTP-BINDING
Paelopatides55111NETRIN RECEPTOR UNC5
Paelopatides55112NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides55113NETRIN RECEPTOR UNC5
Paelopatides55114EPM2A-INTERACTING PROTEIN 1
Paelopatides55115EPM2A-INTERACTING PROTEIN 1
Paelopatides55116MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides55117MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides55118
Paelopatides55119ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55120
Paelopatides55121ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55123
Paelopatides55124
Paelopatides55125
Paelopatides55126
Paelopatides55127MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides55128
Paelopatides55129PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides55130CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55131
Paelopatides55132REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55133REVERSE TRANSCRIPTASES
Paelopatides55134-
Paelopatides55135CYTOCHROME P450 20A1
Paelopatides55136
Paelopatides55137CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55138ACTIN
Paelopatides55139REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55140NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides55141TYROSINE-PROTEIN KINASE
Paelopatides55142DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides55143PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14
Paelopatides55144
Paelopatides55145
Paelopatides55146PROTEIN CBG26694
Paelopatides55147PROTEIN CBG26694
Paelopatides55148
Paelopatides55149CYTOCHROME P450 508A4-RELATED
Paelopatides55150TETRASPANIN
Paelopatides55151
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