The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides55152 | TETRASPANIN |
Paelopatides55153 | TETRASPANIN |
Paelopatides55154 | TETRASPANIN |
Paelopatides55155 | BCL-2 RELATED |
Paelopatides55156 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
Paelopatides55157 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
Paelopatides55158 | |
Paelopatides55159 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55160 | |
Paelopatides55161 | EXPRESSED PROTEIN |
Paelopatides55162 | |
Paelopatides55163 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Paelopatides55164 | |
Paelopatides55165 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55166 | |
Paelopatides55167 | |
Paelopatides55168 | SEC24-RELATED PROTEIN |
Paelopatides55169 | |
Paelopatides55170 | DNAJ HOMOLOG SUBFAMILY C MEMBER 22 |
Paelopatides55171 | |
Paelopatides55172 | GUSTATORY RECEPTOR |
Paelopatides55173 | AHD DOMAIN-CONTAINING PROTEIN |
Paelopatides55174 | RIBOSOMAL PROTEIN S19P FAMILY MEMBER |
Paelopatides55175 | NADH DEHYDROGENASE |
Paelopatides55176 | |
Paelopatides55177 | MUCIN-22 |
Paelopatides55178 | SH3 DOMAIN-CONTAINING |
Paelopatides55179 | COMPLEMENT FACTOR H-RELATED |
Paelopatides55180 | |
Paelopatides55181 | PROTEIN CBG26694 |
Paelopatides55182 | |
Paelopatides55183 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55184 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Paelopatides55185 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
Paelopatides55186 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Paelopatides55187 | E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 |
Paelopatides55188 | BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1 |
Paelopatides55189 | AMINOMETHYLTRANSFERASE |
Paelopatides55190 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides55191 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides55192 | 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 |
Paelopatides55193 | |
Paelopatides55194 | |
Paelopatides55195 | |
Paelopatides55196 | |
Paelopatides55197 | LAMIN DM0-RELATED |
Paelopatides55198 | TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 |
Paelopatides55199 | CENTROMERE PROTEIN H |
Paelopatides55200 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Paelopatides55201 |