The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides55252 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55253 | PROTEIN CBG26694 |
Paelopatides55254 | PROTEIN CBG26694 |
Paelopatides55255 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55256 | |
Paelopatides55257 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides55258 | PROTEIN CBG26694 |
Paelopatides55259 | RETROTRANSPOSON |
Paelopatides55260 | RETROTRANSPOSON |
Paelopatides55261 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides55262 | EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
Paelopatides55263 | PROTEIN CBG19621 |
Paelopatides55264 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides55265 | |
Paelopatides55266 | |
Paelopatides55267 | |
Paelopatides55268 | NETRIN RECEPTOR UNC5 |
Paelopatides55270 | |
Paelopatides55271 | POL PROTEIN |
Paelopatides55272 | RALA BINDING PROTEIN 1 RALBP1 |
Paelopatides55273 | |
Paelopatides55274 | |
Paelopatides55275 | PROTEIN KISH-A |
Paelopatides55277 | |
Paelopatides55278 | RAB11-FAMILY INTERACTING PROTEIN |
Paelopatides55279 | |
Paelopatides55280 | RAB11-FAMILY INTERACTING PROTEIN |
Paelopatides55281 | RAB11-FAMILY INTERACTING PROTEIN |
Paelopatides55282 | LETHAL 2 GIANT LARVAE PROTEIN |
Paelopatides55283 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Paelopatides55284 | KICSTOR COMPLEX PROTEIN SZT2 |
Paelopatides55285 | |
Paelopatides55286 | |
Paelopatides55287 | |
Paelopatides55288 | |
Paelopatides55289 | |
Paelopatides55290 | |
Paelopatides55291 | ALPHA-2,8-SIALYLTRANSFERASE |
Paelopatides55292 | PROTEIN CBG26694 |
Paelopatides55293 | PROTEIN CBG26694 |
Paelopatides55294 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
Paelopatides55295 | |
Paelopatides55296 | MEMBRANE-ANCHORED JUNCTION PROTEIN MAJIN |
Paelopatides55297 | DESUMOYLATING ISOPEPTIDASE |
Paelopatides55298 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER |
Paelopatides55299 | PROTEIN, PUTATIVE-RELATED |
Paelopatides55300 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides55301 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides55302 | TRANSPOSON |
Paelopatides55303 | N-LYSINE METHYLTRANSFERASE KMT5A |