The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides55363 | |
| Paelopatides55364 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides55365 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
| Paelopatides55366 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides55367 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides55368 | |
| Paelopatides55369 | INTEGRIN BETA-1-BINDING PROTEIN 1 |
| Paelopatides55370 | PROTEIN CBG20215-RELATED |
| Paelopatides55371 | FTP DOMAIN-CONTAINING PROTEIN |
| Paelopatides55372 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides55373 | AGAP005574-PA |
| Paelopatides55374 | INHIBITOR OF APOPTOSIS |
| Paelopatides55375 | |
| Paelopatides55377 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides55378 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides55379 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides55380 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides55381 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides55382 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides55383 | REVERSE TRANSCRIPTASES |
| Paelopatides55384 | NUCLEOPORIN AMO1-LIKE |
| Paelopatides55385 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides55386 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides55387 | |
| Paelopatides55388 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55389 | REVERSE TRANSCRIPTASES |
| Paelopatides55390 | CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED |
| Paelopatides55391 | |
| Paelopatides55392 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| Paelopatides55393 | AGAP011099-PA |
| Paelopatides55394 | RETROTRANSPOSON |
| Paelopatides55395 | MYOSIN |
| Paelopatides55396 | AGAP011099-PA |
| Paelopatides55397 | MATRIX PROTEIN, PUTATIVE-RELATED |
| Paelopatides55398 | |
| Paelopatides55399 | GAG-RELATED PROTEIN |
| Paelopatides55400 | |
| Paelopatides55401 | |
| Paelopatides55402 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides55403 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides55404 | PROTEIN CBG26694 |
| Paelopatides55406 | |
| Paelopatides55407 | MUCOLIPIN |
| Paelopatides55408 | PHOSPHOLIPASE A2 FAMILY MEMBER |
| Paelopatides55409 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55410 | |
| Paelopatides55411 | CS DOMAIN-CONTAINING PROTEIN |
| Paelopatides55412 | |
| Paelopatides55413 | |
| Paelopatides55414 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
