About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55469PROTEIN CBG26694
Paelopatides55470NOP SEVEN ASSOCIATED PROTEIN 1
Paelopatides55471NOP SEVEN ASSOCIATED PROTEIN 1
Paelopatides55472
Paelopatides55473PROTEIN CBG26694
Paelopatides55474
Paelopatides55475ENDONUCLEASE-RELATED
Paelopatides55478CRUMBS FAMILY MEMBER
Paelopatides55479CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
Paelopatides55480REVERSE TRANSCRIPTASES
Paelopatides55481REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55482GUANYLYL CYCLASE
Paelopatides55483RETROTRANSPOSON
Paelopatides55484PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides55485RETROTRANSPOSON
Paelopatides55486
Paelopatides55487
Paelopatides55488
Paelopatides55489REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55490MACROGLOBULIN / COMPLEMENT
Paelopatides55491PROTEIN CBG20422
Paelopatides55492INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides55493REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55494ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides55495V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A
Paelopatides55496ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides55497ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55498EPM2A-INTERACTING PROTEIN 1
Paelopatides55499PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides55500GPI MANNOSYLTRANSFERASE 2
Paelopatides55501
Paelopatides55502
Paelopatides55503NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER
Paelopatides55504
Paelopatides55505
Paelopatides55506ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55507ENZYMATIC POLYPROTEIN-RELATED
Paelopatides55508FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55509FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55510ALPHA-AMYLASE FAMILY MEMBER
Paelopatides55511TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN15
Paelopatides555124.1 G PROTEIN
Paelopatides55513RETROTRANSPOSON
Paelopatides55514AMINE OXIDASE
Paelopatides55515
Paelopatides55516APOLIPOPROTEIN L
Paelopatides55517
Paelopatides55518G-PROTEIN COUPLED RECEPTOR
Paelopatides55519ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides55520ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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