The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides55521 | HMG DOMAIN-CONTAINING PROTEIN 3 |
| Paelopatides55522 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55523 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides55524 | PROTEIN CBG26694 |
| Paelopatides55525 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| Paelopatides55526 | |
| Paelopatides55527 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides55528 | |
| Paelopatides55529 | |
| Paelopatides55530 | |
| Paelopatides55531 | |
| Paelopatides55532 | |
| Paelopatides55533 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55534 | CHARGED MULTIVESICULAR BODY PROTEIN |
| Paelopatides55535 | - |
| Paelopatides55536 | UNCHARACTERIZED |
| Paelopatides55537 | |
| Paelopatides55539 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
| Paelopatides55540 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55541 | FRIZZLED |
| Paelopatides55542 | |
| Paelopatides55543 | GH3 DOMAIN-CONTAINING PROTEIN |
| Paelopatides55544 | |
| Paelopatides55545 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides55546 | |
| Paelopatides55547 | NETRIN RECEPTOR UNC5 |
| Paelopatides55548 | FI04643P-RELATED |
| Paelopatides55549 | |
| Paelopatides55550 | FI04643P-RELATED |
| Paelopatides55551 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides55552 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55553 | COLLAGEN ALPHA |
| Paelopatides55554 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55555 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55556 | AGAP008170-PA |
| Paelopatides55557 | |
| Paelopatides55558 | |
| Paelopatides55559 | |
| Paelopatides55560 | |
| Paelopatides55561 | |
| Paelopatides55562 | |
| Paelopatides55563 | ODD-SKIPPED - RELATED |
| Paelopatides55564 | NADH-UBIQUINONE OXIDOREDUCTASE AGGG SUBUNIT |
| Paelopatides55565 | |
| Paelopatides55566 | |
| Paelopatides55567 | AGAP008170-PA |
| Paelopatides55568 | |
| Paelopatides55569 | TYROSINE-PROTEIN KINASE |
| Paelopatides55570 | IP13529P |
| Paelopatides55571 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
