The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides55678 | |
| Paelopatides55679 | ENOLASE |
| Paelopatides55680 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 53 |
| Paelopatides55681 | TEX261 PROTEIN |
| Paelopatides55682 | DOCKING PROTEIN RELATED |
| Paelopatides55683 | |
| Paelopatides55684 | SOLUTE CARRIER FAMILY 25 |
| Paelopatides55685 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED |
| Paelopatides55686 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| Paelopatides55687 | ORGANIC SOLUTE TRANSPORTER-RELATED |
| Paelopatides55688 | PROTEIN PM1 |
| Paelopatides55689 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B |
| Paelopatides55690 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Paelopatides55691 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55692 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| Paelopatides55693 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides55694 | |
| Paelopatides55695 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides55696 | |
| Paelopatides55697 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| Paelopatides55698 | G PATCH DOMAIN CONTAINING PROTEIN 2 |
| Paelopatides55699 | |
| Paelopatides55700 | |
| Paelopatides55701 | |
| Paelopatides55702 | |
| Paelopatides55703 | BUCENTAUR RELATED |
| Paelopatides55704 | RING FINGER PROTEIN 31-RELATED |
| Paelopatides55705 | RING FINGER PROTEIN 31-RELATED |
| Paelopatides55706 | |
| Paelopatides55707 | |
| Paelopatides55708 | |
| Paelopatides55709 | |
| Paelopatides55710 | |
| Paelopatides55711 | |
| Paelopatides55712 | |
| Paelopatides55713 | |
| Paelopatides55714 | |
| Paelopatides55715 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides55716 | BEN DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides55717 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| Paelopatides55718 | |
| Paelopatides55719 | FLAVIN MONOAMINE OXIDASE |
| Paelopatides55720 | |
| Paelopatides55721 | TETRATRICOPEPTIDE REPEAT PROTEIN 14 |
| Paelopatides55733 | PROTEIN CBG26694 |
| Paelopatides55734 | |
| Paelopatides55735 | |
| Paelopatides55736 | |
| Paelopatides55737 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides55738 | HYR DOMAIN-CONTAINING PROTEIN |
