The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides55739 | NOTCH LIGAND FAMILY MEMBER |
| Paelopatides55740 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| Paelopatides55741 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55742 | PROTEIN CBG26694 |
| Paelopatides55743 | UNCHARACTERIZED |
| Paelopatides55744 | LEUCINE ZIPPER PROTEIN 4-RELATED |
| Paelopatides55745 | UNCHARACTERIZED |
| Paelopatides55746 | AMNIONLESS |
| Paelopatides55747 | ANKYRIN REPEAT FAMILY PROTEIN |
| Paelopatides55748 | ACROSIN-RELATED |
| Paelopatides55749 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
| Paelopatides55750 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides55752 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55753 | POL PROTEIN |
| Paelopatides55754 | |
| Paelopatides55755 | CENTAURIN/ARF |
| Paelopatides55756 | |
| Paelopatides55757 | ARYLSULFATASE |
| Paelopatides55758 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
| Paelopatides55759 | |
| Paelopatides55760 | |
| Paelopatides55761 | MALONYL-COA ACP TRANSACYLASE, ACP-BINDING |
| Paelopatides55762 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides55763 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides55764 | RETICULON-LIKE PROTEIN |
| Paelopatides55765 | |
| Paelopatides55766 | CHROMOSOME 6 C6ORF201 HOMOLOG |
| Paelopatides55767 | |
| Paelopatides55768 | SULFOTRANSFERASE SULT |
| Paelopatides55769 | |
| Paelopatides55770 | |
| Paelopatides55771 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
| Paelopatides55772 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| Paelopatides55773 | UNCHARACTERIZED |
| Paelopatides55774 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| Paelopatides55775 | |
| Paelopatides55776 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| Paelopatides55777 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| Paelopatides55778 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides55779 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| Paelopatides55780 | |
| Paelopatides55781 | WD40 REPEAT PROTEIN |
| Paelopatides55782 | |
| Paelopatides55783 | COILED-COIL DOMAIN-CONTAINING PROTEIN 151 |
| Paelopatides55784 | |
| Paelopatides55785 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| Paelopatides55786 | |
| Paelopatides55787 | RNA HELICASE |
| Paelopatides55788 | RNA HELICASE |
| Paelopatides55789 |
