About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55841REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55842REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55843REVERSE TRANSCRIPTASES
Paelopatides55844CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides55845IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides55846IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides55847FOLLISTATIN-RELATED
Paelopatides55848SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides55849REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55850REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55851PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides55852PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides55853
Paelopatides55854FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55855
Paelopatides55856ATP-DEPENDENT DNA HELICASE
Paelopatides55857TUBULIN
Paelopatides55858TUBULIN
Paelopatides55859BONUS, ISOFORM C-RELATED
Paelopatides55862UNCHARACTERIZED
Paelopatides55863UNCHARACTERIZED
Paelopatides55864
Paelopatides55865REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55866ATP-DEPENDENT DNA HELICASE
Paelopatides55867THAP DOMAIN PROTEIN
Paelopatides55868PROTEIN CBG26694
Paelopatides55869
Paelopatides55870GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT
Paelopatides55871
Paelopatides55872POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2
Paelopatides55873
Paelopatides55874
Paelopatides55875GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45
Paelopatides55876FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides55877RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Paelopatides55878
Paelopatides55879ENDONUCLEASE-RELATED
Paelopatides55880
Paelopatides55881-
Paelopatides55882
Paelopatides55883
Paelopatides55884U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B
Paelopatides55885POL PROTEIN
Paelopatides5588660S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N
Paelopatides5588726S PROTEASOME REGULATORY SUBUNIT
Paelopatides55888NUCLEAR FACTOR-RELATED
Paelopatides55889
Paelopatides55890
Paelopatides55891ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
Paelopatides55892CARBOHYDRATE SULFOTRANSFERASE
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