The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides55996 | RETROTRANSPOSON |
Paelopatides55997 | RETROTRANSPOSON |
Paelopatides55998 | |
Paelopatides55999 | |
Paelopatides56000 | |
Paelopatides56001 | COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 |
Paelopatides56002 | SKI ONCOGENE-RELATED |
Paelopatides56003 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides56004 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides56005 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides56006 | |
Paelopatides56007 | |
Paelopatides56008 | NEPHRIN |
Paelopatides56009 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides56010 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides56011 | |
Paelopatides56012 | |
Paelopatides56013 | |
Paelopatides56014 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides56015 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides56016 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Paelopatides56017 | FI04643P-RELATED |
Paelopatides56018 | PROTEIN CBG26694 |
Paelopatides56019 | FI04643P-RELATED |
Paelopatides56020 | |
Paelopatides56021 | |
Paelopatides56022 | KELCH PROTEIN |
Paelopatides56023 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides56024 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
Paelopatides56025 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
Paelopatides56026 | SODIUM-BILE ACID COTRANSPORTER |
Paelopatides56027 | |
Paelopatides56028 | POTASSIUM CHANNEL, SUBFAMILY K |
Paelopatides56029 | |
Paelopatides56030 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides56031 | |
Paelopatides56032 | |
Paelopatides56033 | |
Paelopatides56034 | |
Paelopatides56035 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides56036 | PROTEIN CBG26694 |
Paelopatides56037 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Paelopatides56038 | FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER |
Paelopatides56039 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
Paelopatides56040 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Paelopatides56041 | DYNEIN HEAVY CHAIN |
Paelopatides56042 | DYNEIN HEAVY CHAIN |
Paelopatides56043 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides56050 | |
Paelopatides56051 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |