The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides56052 | |
| Paelopatides56053 | STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN |
| Paelopatides56054 | ACETYL-COA C-ACETYLTRANSFERASE |
| Paelopatides56055 | FERREDOXIN/ADRENODOXIN |
| Paelopatides56056 | OS08G0560600 PROTEIN |
| Paelopatides56057 | |
| Paelopatides56058 | PROTEIN CBG26694 |
| Paelopatides56059 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides56060 | |
| Paelopatides56061 | |
| Paelopatides56062 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides56063 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56064 | RETROTRANSPOSON |
| Paelopatides56065 | RETROTRANSPOSON |
| Paelopatides56066 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56067 | HMG DOMAIN-CONTAINING PROTEIN 3 |
| Paelopatides56069 | |
| Paelopatides56070 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides56071 | POL PROTEIN |
| Paelopatides56072 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides56074 | |
| Paelopatides56075 | PROTEIN CBG26694 |
| Paelopatides56076 | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE |
| Paelopatides56077 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides56078 | RETROTRANSPOSON |
| Paelopatides56079 | RETROTRANSPOSON |
| Paelopatides56080 | |
| Paelopatides56081 | |
| Paelopatides56082 | |
| Paelopatides56083 | PUTATIVE-RELATED |
| Paelopatides56084 | |
| Paelopatides56085 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides56086 | ZGC:195170 |
| Paelopatides56087 | TYROSINE-PROTEIN KINASE |
| Paelopatides56088 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
| Paelopatides56089 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
| Paelopatides56090 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
| Paelopatides56091 | |
| Paelopatides56092 | PLEXIN |
| Paelopatides56093 | PLEXIN |
| Paelopatides56094 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
| Paelopatides56095 | - |
| Paelopatides56096 | SYNOVIAL SARCOMA, X MEMBER |
| Paelopatides56097 | TOL-PAL SYSTEM PROTEIN TOLA |
| Paelopatides56098 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56099 | |
| Paelopatides56100 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56101 | SOLUTE CARRIER FAMILY 13 MEMBER |
| Paelopatides56102 | PROTEIN CBG26694 |
| Paelopatides56104 | PROTEIN CBG26694 |
