About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56158FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
Paelopatides56159ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides56160TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides56161
Paelopatides56162
Paelopatides56163
Paelopatides56164ZYGIN
Paelopatides56165
Paelopatides56166
Paelopatides56167
Paelopatides56168ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56169ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56170ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56171LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides56172MULTICOPPER OXIDASE-RELATED
Paelopatides56173NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides56174
Paelopatides56175
Paelopatides56176
Paelopatides56177NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED
Paelopatides56178DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides56179CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED
Paelopatides56180MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides56181SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides56182SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides56183SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides56184
Paelopatides56185UNCHARACTERIZED
Paelopatides56186IP13529P
Paelopatides56187
Paelopatides56188
Paelopatides56189BUCENTAUR RELATED
Paelopatides56190
Paelopatides56191E3 UBIQUITIN-PROTEIN LIGASE TM129
Paelopatides56192
Paelopatides56193-
Paelopatides56194SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides56195N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides56196L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides56197
Paelopatides56198VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN
Paelopatides56199EXODEOXYRIBONUCLEASE III
Paelopatides56200BUCENTAUR RELATED
Paelopatides56201BUCENTAUR RELATED
Paelopatides56202REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56203SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides56204
Paelopatides56205
Paelopatides56206REVERSE TRANSCRIPTASES
Paelopatides56207
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