The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides56105 | HEAT SHOCK PROTEIN 70KDA |
Paelopatides56106 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides56107 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides56108 | RAN BINDING PROTEIN 9-RELATED |
Paelopatides56109 | ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 |
Paelopatides56110 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
Paelopatides56111 | |
Paelopatides56112 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
Paelopatides56113 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER |
Paelopatides56114 | UNCHARACTERIZED |
Paelopatides56115 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides56116 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides56117 | NCK-ASSOCIATED PROTEIN 1 |
Paelopatides56118 | ENDONUCLEASE-RELATED |
Paelopatides56119 | |
Paelopatides56120 | |
Paelopatides56121 | PROTEIN CBG26694 |
Paelopatides56122 | UNCHARACTERIZED |
Paelopatides56123 | PHENYLALANYL-TRNA SYNTHETASE |
Paelopatides56124 | - |
Paelopatides56125 | |
Paelopatides56126 | |
Paelopatides56127 | S-ANTIGEN PROTEIN |
Paelopatides56128 | BEIGE/BEACH-RELATED |
Paelopatides56129 | |
Paelopatides56130 | |
Paelopatides56131 | |
Paelopatides56132 | |
Paelopatides56133 | HL07962P-RELATED |
Paelopatides56134 | |
Paelopatides56135 | |
Paelopatides56136 | BUCENTAUR RELATED |
Paelopatides56137 | ENDONUCLEASE |
Paelopatides56138 | GLUTATHIONE S-TRANSFERASE |
Paelopatides56139 | GLUTATHIONE S-TRANSFERASE |
Paelopatides56140 | TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN |
Paelopatides56141 | DIAMINE N-ACETYLTRANSFERASE |
Paelopatides56142 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Paelopatides56143 | |
Paelopatides56144 | PROTEIN EVA-1 |
Paelopatides56145 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides56149 | UNCHARACTERIZED |
Paelopatides56150 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
Paelopatides56151 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
Paelopatides56152 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides56153 | RHO GUANINE EXCHANGE FACTOR-RELATED |
Paelopatides56154 | |
Paelopatides56155 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides56156 | |
Paelopatides56157 |