The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides56208 | NETRIN RECEPTOR UNC5 |
| Paelopatides56209 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| Paelopatides56210 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides56211 | ENDONUCLEASE-RELATED |
| Paelopatides56212 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides56213 | POL PROTEIN |
| Paelopatides56214 | |
| Paelopatides56215 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides56216 | |
| Paelopatides56217 | |
| Paelopatides56218 | |
| Paelopatides56219 | |
| Paelopatides56220 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56221 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56222 | |
| Paelopatides56223 | REVERSE TRANSCRIPTASES |
| Paelopatides56224 | 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL |
| Paelopatides56225 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides56226 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides56227 | BUCENTAUR RELATED |
| Paelopatides56228 | BUCENTAUR RELATED |
| Paelopatides56229 | |
| Paelopatides56230 | CYTOCHROME P450 FAMILY 4 |
| Paelopatides56231 | UNCHARACTERIZED |
| Paelopatides56232 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides56233 | PROTEIN CBG26694 |
| Paelopatides56234 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides56235 | |
| Paelopatides56236 | |
| Paelopatides56237 | SI:CH211-196P9.1-RELATED |
| Paelopatides56238 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides56239 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| Paelopatides56240 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| Paelopatides56241 | |
| Paelopatides56242 | PROTEIN CBG20567 |
| Paelopatides56243 | |
| Paelopatides56244 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| Paelopatides56261 | |
| Paelopatides56262 | |
| Paelopatides56263 | |
| Paelopatides56264 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56265 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Paelopatides56266 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56267 | |
| Paelopatides56268 | |
| Paelopatides56269 | |
| Paelopatides56270 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56271 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| Paelopatides56272 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| Paelopatides56273 | TESTIS-EXPRESSED PROTEIN 33 |
