The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides55623 | SODIUM-BILE ACID COTRANSPORTER |
Paelopatides55624 | ARYLSULFATASE FAMILY MEMBER |
Paelopatides55625 | FI01416P |
Paelopatides55626 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides55627 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides55628 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
Paelopatides55629 | |
Paelopatides55630 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
Paelopatides55631 | |
Paelopatides55632 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides55633 | PROTEIN DIAPHANOUS |
Paelopatides55634 | PROTEIN DIAPHANOUS |
Paelopatides55635 | |
Paelopatides55636 | |
Paelopatides55637 | |
Paelopatides55638 | - |
Paelopatides55640 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT |
Paelopatides55641 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
Paelopatides55642 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
Paelopatides55644 | HYR DOMAIN-CONTAINING PROTEIN |
Paelopatides55645 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides55646 | CRUMBS FAMILY MEMBER |
Paelopatides55647 | |
Paelopatides55648 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides55649 | PROTEIN CBG26694 |
Paelopatides55650 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Paelopatides55651 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides55652 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides55653 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides55654 | FAT ATYPICAL CADHERIN-RELATED |
Paelopatides55655 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55656 | |
Paelopatides55657 | PROTEIN CBG26694 |
Paelopatides55658 | |
Paelopatides55662 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides55663 | TYROSINE-PROTEIN KINASE |
Paelopatides55664 | |
Paelopatides55665 | |
Paelopatides55666 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55667 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
Paelopatides55668 | |
Paelopatides55669 | |
Paelopatides55670 | |
Paelopatides55671 | SOLUTE CARRIER FAMILY 35 |
Paelopatides55672 | ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL |
Paelopatides55673 | TETRATRICOPEPTIDE REPEAT PROTEIN 4 |
Paelopatides55674 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides55675 | |
Paelopatides55676 | |
Paelopatides55677 | PROTEIN CBG26694 |