The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides55000 | |
Paelopatides55001 | HYR DOMAIN-CONTAINING PROTEIN |
Paelopatides55002 | HYR DOMAIN-CONTAINING PROTEIN |
Paelopatides55003 | HYR DOMAIN-CONTAINING PROTEIN |
Paelopatides55004 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides55005 | PROTEIN CBG26694 |
Paelopatides55006 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides55008 | SPHINGOMYELINASE FAMILY MEMBER |
Paelopatides55009 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides55010 | |
Paelopatides55011 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides55012 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides55013 | |
Paelopatides55014 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Paelopatides55015 | |
Paelopatides55016 | |
Paelopatides55017 | |
Paelopatides55018 | |
Paelopatides55019 | |
Paelopatides55020 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides55021 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides55022 | |
Paelopatides55023 | |
Paelopatides55024 | PROTEIN CBG26694 |
Paelopatides55025 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55026 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
Paelopatides55027 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
Paelopatides55028 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
Paelopatides55029 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
Paelopatides55030 | VEPH-A/MELTED |
Paelopatides55031 | |
Paelopatides55032 | |
Paelopatides55033 | SULFATE TRANSPORTER |
Paelopatides55034 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55035 | SULFATE TRANSPORTER |
Paelopatides55036 | TRANSMEMBRANE PROTEIN 187 |
Paelopatides55037 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55038 | PROTEIN FAM167A |
Paelopatides55039 | |
Paelopatides55040 | 4.1 G PROTEIN |
Paelopatides55041 | 4.1 G PROTEIN |
Paelopatides55042 | 4.1 G PROTEIN |
Paelopatides55043 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides55044 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
Paelopatides55045 | ADP RIBOSYLATION FACTOR-RELATED |
Paelopatides55046 | |
Paelopatides55047 | |
Paelopatides55048 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides55049 | NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1 |
Paelopatides55050 |