The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides54747 | |
Paelopatides54748 | PERIAXIN/AHNAK |
Paelopatides54749 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54750 | |
Paelopatides54751 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54752 | |
Paelopatides54753 | NECTIN-RELATED |
Paelopatides54754 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides54755 | PROTEIN CBG26694 |
Paelopatides54756 | |
Paelopatides54757 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
Paelopatides54758 | |
Paelopatides54759 | PROPERDIN |
Paelopatides54760 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54761 | MALE STERILITY PROTEIN 2-RELATED |
Paelopatides54762 | |
Paelopatides54763 | - |
Paelopatides54764 | |
Paelopatides54765 | |
Paelopatides54766 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER |
Paelopatides54767 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides54768 | SERINE/THREONINE-PROTEIN KINASE 17 |
Paelopatides54769 | MYD88 |
Paelopatides54770 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54771 | |
Paelopatides54772 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides54773 | |
Paelopatides54774 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides54775 | PUTATIVE-RELATED |
Paelopatides54776 | |
Paelopatides54777 | REVERSE TRANSCRIPTASE |
Paelopatides54778 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides54779 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
Paelopatides54780 | METALLOPROTEASE INHIBITOR |
Paelopatides54781 | METALLOPROTEASE INHIBITOR |
Paelopatides54782 | METALLOPROTEASE INHIBITOR |
Paelopatides54783 | |
Paelopatides54784 | METHYLTRANSFERASE-RELATED |
Paelopatides54785 | RAN GTPASE |
Paelopatides54786 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54787 | |
Paelopatides54788 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
Paelopatides54789 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
Paelopatides54790 | |
Paelopatides54791 | BETA TRANSDUCIN-RELATED PROTEIN |
Paelopatides54792 | PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE |
Paelopatides54793 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54794 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54795 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
Paelopatides54796 | REVERSE TRANSCRIPTASES |