The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides54594 | DYNEIN INTERMEDIATE CHAIN |
Paelopatides54595 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides54596 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides54597 | PROTEIN CBG26694 |
Paelopatides54598 | |
Paelopatides54599 | |
Paelopatides54600 | |
Paelopatides54601 | PROTEIN CBG26694 |
Paelopatides54602 | PROTEIN CBG26694 |
Paelopatides54603 | POL PROTEIN |
Paelopatides54604 | |
Paelopatides54605 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides54606 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54607 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54608 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides54609 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
Paelopatides54610 | GAG-RELATED PROTEIN |
Paelopatides54611 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides54612 | RING ZINC FINGER |
Paelopatides54613 | EXPORTIN 1/5 |
Paelopatides54614 | PROTEIN CBG26694 |
Paelopatides54615 | PROTEIN CBG26694 |
Paelopatides54616 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Paelopatides54617 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides54618 | |
Paelopatides54619 | |
Paelopatides54620 | TUBULIN |
Paelopatides54621 | BTB DOMAIN-CONTAINING PROTEIN |
Paelopatides54622 | |
Paelopatides54623 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
Paelopatides54624 | COFILIN-RELATED |
Paelopatides54625 | GH12955P |
Paelopatides54626 | |
Paelopatides54627 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
Paelopatides54628 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides54629 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides54630 | HEDGEHOG |
Paelopatides54631 | NADPH OXIDASE |
Paelopatides54632 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |
Paelopatides54633 | |
Paelopatides54634 | GAMMA TUBULIN COMPLEX PROTEIN |
Paelopatides54635 | GAMMA TUBULIN COMPLEX PROTEIN |
Paelopatides54636 | LEUCINE RICH REPEAT PROTEIN |
Paelopatides54637 | PHOSPHOMEVALONATE KINASE |
Paelopatides54638 | |
Paelopatides54639 | ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 |
Paelopatides54640 | CCCH ZINC FINGER/TIS11-RELATED |
Paelopatides54641 | BONUS, ISOFORM C-RELATED |
Paelopatides54642 | RNA BINDING PROTEIN |
Paelopatides54643 | PROTEIN CBG26694 |