The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides54897 | PROTEIN CBG26694 |
| Paelopatides54898 | CARBOHYDRATE SULFOTRANSFERASE |
| Paelopatides54899 | |
| Paelopatides54900 | HIGH MOBILITY GROUP PROTEIN DSP1 |
| Paelopatides54901 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides54902 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides54903 | |
| Paelopatides54904 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54905 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides54906 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides54907 | |
| Paelopatides54908 | |
| Paelopatides54909 | RETROTRANSPOSON |
| Paelopatides54910 | RETROTRANSPOSON |
| Paelopatides54911 | |
| Paelopatides54912 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides54913 | |
| Paelopatides54914 | |
| Paelopatides54915 | SLR5058 PROTEIN |
| Paelopatides54916 | |
| Paelopatides54917 | |
| Paelopatides54918 | |
| Paelopatides54919 | PROTEIN CBG26694 |
| Paelopatides54920 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides54921 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides54922 | POL PROTEIN |
| Paelopatides54923 | |
| Paelopatides54924 | RAB6A-GEF COMPLEX PARTNER PROTEIN 1 |
| Paelopatides54925 | PROTEIN CBG26694 |
| Paelopatides54926 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides54927 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides54928 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides54929 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides54930 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| Paelopatides54931 | TYROSINE-PROTEIN KINASE |
| Paelopatides54932 | TORSIN-1A-INTERACTING PROTEIN |
| Paelopatides54933 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides54934 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides54935 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides54936 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54937 | |
| Paelopatides54938 | 41-2 PROTEIN ANTIGEN-RELATED |
| Paelopatides54939 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54940 | |
| Paelopatides54941 | DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides54942 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides54943 | ZGC:195170 |
| Paelopatides54944 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides54945 | |
| Paelopatides54946 | ACYL-COA DESATURASE |
