The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides54111 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides54112 | |
| Paelopatides54113 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides54114 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54115 | TYROSINE-PROTEIN KINASE |
| Paelopatides54116 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides54117 | TAX1 BINDING PROTEIN-RELATED |
| Paelopatides54118 | |
| Paelopatides54119 | |
| Paelopatides54120 | MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F |
| Paelopatides54121 | |
| Paelopatides54122 | PROTEIN CBG26694 |
| Paelopatides54123 | |
| Paelopatides54124 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides54125 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides54126 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54127 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54128 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
| Paelopatides54129 | GAG-RELATED PROTEIN |
| Paelopatides54130 | |
| Paelopatides54131 | METALLOPROTEASE INHIBITOR |
| Paelopatides54132 | METALLOPROTEASE INHIBITOR |
| Paelopatides54133 | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR |
| Paelopatides54134 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides54135 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides54136 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides54137 | PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED |
| Paelopatides54138 | |
| Paelopatides54139 | |
| Paelopatides54140 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides54141 | C-TYPE LECTIN SUPERFAMILY MEMBER |
| Paelopatides54142 | |
| Paelopatides54143 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54144 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides54145 | |
| Paelopatides54146 | SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN |
| Paelopatides54148 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides54149 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides54150 | |
| Paelopatides54152 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides54153 | |
| Paelopatides54154 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides54155 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides54156 | POL PROTEIN |
| Paelopatides54157 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| Paelopatides54158 | |
| Paelopatides54159 | |
| Paelopatides54160 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| Paelopatides54161 | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY |
| Paelopatides54162 |
