About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52865SORTING NEXIN
Paelopatides52866NISCHARIN RELATED
Paelopatides52867REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52868TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 3
Paelopatides52869
Paelopatides52870BOLA-LIKE PROTEIN 3
Paelopatides52871ACYL-COA SYNTHETASE
Paelopatides52872
Paelopatides52873AMINO ACID TRANSPORTER
Paelopatides52874MATRIX METALLOPROTEINASE
Paelopatides52875MATRIX METALLOPROTEINASE
Paelopatides52876SENSOR KINASE-RELATED
Paelopatides52880RAS-RELATED PROTEIN RAB
Paelopatides52881
Paelopatides52882
Paelopatides52883POL PROTEIN
Paelopatides52884
Paelopatides52885DNA TOPOISOMERASE I
Paelopatides52886L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides52887CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
Paelopatides52888ANKYRIN REPEAT PROTEIN
Paelopatides52889PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3
Paelopatides52890PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3
Paelopatides52891-
Paelopatides52892
Paelopatides52893
Paelopatides52894
Paelopatides52895TYROSINE-PROTEIN KINASE
Paelopatides52896
Paelopatides52897
Paelopatides52898B-CELL RECEPTOR CD22
Paelopatides52899CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52900CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52901
Paelopatides52902ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52903PROTEIN CBG26694
Paelopatides52904
Paelopatides52905EPM2A-INTERACTING PROTEIN 1
Paelopatides52906FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52907PROTEIN, PUTATIVE-RELATED
Paelopatides52908METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides52909ZINC FINGER PROTEIN
Paelopatides52910RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
Paelopatides52911RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
Paelopatides52912
Paelopatides52913C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides52914
Paelopatides52915SMALL UBIQUITIN-RELATED MODIFIER
Paelopatides52916
Paelopatides52917
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