About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52754UNCHARACTERIZED
Paelopatides52755TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides52756ENDONUCLEASE-RELATED
Paelopatides52757PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides52758
Paelopatides52759-
Paelopatides52760
Paelopatides52761ACID AMIDASE
Paelopatides52762ENDONUCLEASE-RELATED
Paelopatides52763REVERSE TRANSCRIPTASES
Paelopatides52764ORMDL PROTEINS
Paelopatides52765CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52766
Paelopatides52767
Paelopatides5277460S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER
Paelopatides52775REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52776CT120 PROTEIN
Paelopatides52777ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides52778FTP DOMAIN-CONTAINING PROTEIN
Paelopatides52779ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides52780PROTEIN CBG26694
Paelopatides52781UNCHARACTERIZED
Paelopatides52782REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52783
Paelopatides52784REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52785ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides52786IP13529P
Paelopatides52787
Paelopatides52788REVERSE TRANSCRIPTASES
Paelopatides52789SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52790
Paelopatides52791TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides52792CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52793VANG-LIKE PROTEIN
Paelopatides52794
Paelopatides52795
Paelopatides52796
Paelopatides52797
Paelopatides52798
Paelopatides52799G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides52800DYNEIN HEAVY CHAIN
Paelopatides52803INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides52805INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides52806DDB1- AND CUL4-ASSOCIATED FACTOR 15
Paelopatides52807RAD50-INTERACTING PROTEIN 1 RINT-1
Paelopatides52808RAD50-INTERACTING PROTEIN 1 RINT-1
Paelopatides52809HISTIDINE-RICH GLYCOPROTEIN
Paelopatides52810NOT56 - RELATED
Paelopatides52811
Paelopatides52812
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