The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides52651 | RIBOFLAVIN TRANSPORTER RIBJ |
Paelopatides52652 | T-LYMPHOCYTE ACTIVATION ANTIGEN |
Paelopatides52653 | DIABLO HOMOLOG, MITOCHONDRIAL |
Paelopatides52654 | RIBOSOME BIOGENESIS REGULATORY PROTEIN |
Paelopatides52655 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52656 | |
Paelopatides52657 | REGULATORY-ASSOCIATED PROTEIN OF MTOR |
Paelopatides52658 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52659 | TNF RECEPTOR ASSOCIATED FACTOR |
Paelopatides52660 | - |
Paelopatides52661 | BEN DOMAIN-CONTAINING PROTEIN 6 |
Paelopatides52662 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52663 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52664 | REVERSE TRANSCRIPTASES |
Paelopatides52665 | WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides52666 | UNCHARACTERIZED |
Paelopatides52667 | UNCHARACTERIZED |
Paelopatides52668 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Paelopatides52669 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Paelopatides52670 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides52672 | REVERSE TRANSCRIPTASES |
Paelopatides52673 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
Paelopatides52674 | |
Paelopatides52675 | |
Paelopatides52676 | |
Paelopatides52677 | |
Paelopatides52678 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides52679 | BONUS, ISOFORM C-RELATED |
Paelopatides52680 | EXPRESSED PROTEIN |
Paelopatides52681 | |
Paelopatides52682 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52683 | |
Paelopatides52684 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides52685 | |
Paelopatides52686 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52687 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
Paelopatides52688 | PARANEOPLASTIC ANTIGEN |
Paelopatides52689 | PIKACHURIN-LIKE PROTEIN |
Paelopatides52690 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides52691 | DESMOGLEIN FAMILY MEMBER |
Paelopatides52692 | PROTEIN CBG26694 |
Paelopatides52693 | PROTEIN CBG26694 |
Paelopatides52694 | CADHERIN-23 |
Paelopatides52695 | GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN |
Paelopatides52696 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
Paelopatides52697 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
Paelopatides52698 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52699 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides52700 | |
Paelopatides52701 | ALPHA-2,8-SIALYLTRANSFERASE |