The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides52546 | NETRIN RECEPTOR UNC5 |
Paelopatides52547 | ENDONUCLEASE |
Paelopatides52548 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
Paelopatides52549 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Paelopatides52550 | PROTEIN CBG26694 |
Paelopatides52551 | PROTEIN CBG26694 |
Paelopatides52552 | |
Paelopatides52553 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides52554 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
Paelopatides52555 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides52556 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides52557 | |
Paelopatides52558 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52559 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52560 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
Paelopatides52561 | PECANEX |
Paelopatides52562 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides52563 | |
Paelopatides52564 | PECANEX |
Paelopatides52565 | RAS-RELATED GTP BINDING RAG/GTR YEAST |
Paelopatides52566 | |
Paelopatides52567 | |
Paelopatides52568 | PROTEIN CBG26694 |
Paelopatides52569 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides52570 | |
Paelopatides52571 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
Paelopatides52572 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides52573 | |
Paelopatides52574 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides52575 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
Paelopatides52576 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides52577 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
Paelopatides52578 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides52579 | - |
Paelopatides52580 | |
Paelopatides52581 | POL PROTEIN |
Paelopatides52582 | |
Paelopatides52583 | BUCENTAUR RELATED |
Paelopatides52584 | |
Paelopatides52585 | |
Paelopatides52586 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Paelopatides52587 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides52588 | PROTEIN CBG26694 |
Paelopatides52589 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52590 | PHOSPHATIDYLGLYCEROL PHOSPHOLIPASE C |
Paelopatides52591 | |
Paelopatides52592 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides52593 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides52594 | |
Paelopatides52595 |